Spoiler Warning for some side missions in Episode 3
So I played Episode 1 & 2 on the normal difficulty however for Episode 3 I felt like playing on the harder difficulty since I had gotten better at the game, it goes well until it comes to the side missions. Basically with my playthrough the rope that leads to skeeters ridge didn't spawn in which makes it impossible to get to skeeter's ridge in the new rework, I spent a couple hours circling the mountains trying to find a way to walk to the ridge but couldn't find a way in. I gave up trying to complete Church Artifact because skeeter's ridge is part of that mission.
The other mission affected was the bunker raid as the backpack with the note didn't spawn in so I couldn't even start the mission, I also found out that one of the books for Tall Tales spawns in one of the bunkers so you can't finish that either.